RE: [PyMOL] PyMOL movie question

2002-09-13 Thread DeLano, Warren
Okay I found the problem... This fails: "mpng mov # will create mov0001.png, mov0002.png, etc." but this: "mpng mov # will create mov0001.png, mov0002.png, etc." works fine. The problem is that PyMOL isn't yet 100% tolerant of comments which follow PyMOL commands on the same line. Unfortu

RE: [PyMOL] PyMOL movie question

2002-09-13 Thread DeLano, Warren
Jennifer, That looks like some blatantly buggy behavior in PyMOL. Strange thing is, I don't get the same behavior on the version I have installed. Thus, I may have inadvertently fixed this problem... What version of PyMOL are you using? (under Windows obviously...) Thanks, Warren -- ma

[PyMOL] PyMOL movie question

2002-09-13 Thread Jennifer Ekstrom
Hello, I'm a new PyMOL user, and am trying to make my first molecular movie. I've inserted the following into my script: mset 1 x120 util.mroll(1,120,1) set ray_trace_frames=1 set cache_frames=0 mclear mpng mov and

[PyMOL] Secondary Structure, DSSP etc

2002-09-13 Thread Michel Fodje
Hi, I currently have an implementation of DSSP in C++ with lots of improvements such as correctly identifying Pi-helices. The output of the program is pseudo-PDB, so you could paste it to the top of your PDB file and most programs, including PyMol would read it accurately. The output additional