[Open Babel] Principal Moment of Inertia

2012-08-03 Thread Kareem Khoury
Is it possible, with Open Babel to calculate the principle moment of inertia for a library of 3d compounds? Thanks -Kareem -- Live Security Virtual Conference Exclusive live event will cover all the ways today's security

[Open Babel] OBFit

2012-08-15 Thread Kareem Khoury
Two questions, one of which Im sure is very simple question but i cant seem to figure it out 1) When i type in the command for obfit: obfit smartscode ref.sdf library.sdf it give me the output only in the command prompt window. I tried adding -o and ouputfile.sd and nothing happened. How do i

[Open Babel] ranking SD files

2013-04-08 Thread Kareem Khoury
is it possible with Babel to re-order an sdf file based off of a data field I have an sdf file with a docking score data filed. i was looking at the --sort command but as far as i can tell it only sorts based off of descriptors. Thanks -Kareem ---