Two questions, one of which Im sure is very simple question but i cant seem
to figure it out
1)
When i type in the command for obfit:
obfit smartscode ref.sdf library.sdf
it give me the output only in the command prompt window.
I tried adding -o and ouputfile.sd and nothing happened. How do i get the
program to give me the output to an sd or sdf file?
2)
Is it possible with this program to fit patterns that are not compleatly
similar ie if i have a library of compounds with pyrimidines and pyridines
could i fit that to a benzyle ring?
Thanks
-Kareem
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