Re: [PATCH] Add FASTX Toolkit.

Ludovic Courtès writes: > Ricardo Wurmus skribis: > >> "fastx-toolkit" installs three m4 files to "$out/share/aclocal", and >> libgtextutils installs an empty "$out/share/aclocal" directoy. I >> reported this upstream, but I did not add a phase to remove these files, >> because I think it's not

Re: [PATCH] gnu: Add Biopython.

Ludovic Courtès writes: > Ricardo Wurmus skribis: > >> From ca3474b1a639e43d708aad4385057cd84e3cce8b Mon Sep 17 00:00:00 2001 >> From: Ricardo Wurmus >> Date: Wed, 15 Apr 2015 17:46:35 +0200 >> Subject: [PATCH] gnu: Add Biopython. >> >> * gnu/packages/bioinformatics.scm (python-biopython, pytho

Re: [PATCH] gnu: Add Biopython.

On Thu, Apr 16, 2015 at 10:46:11AM +0200, Ricardo Wurmus wrote: > http://www.biopython.org/DIST/LICENSE It starts like this: "Permission to use, copy, modify, and distribute this software and its documentation with or without modifications and for any purpose and without fee is hereby granted"

[PATCH] gnu: Add subread.

>From fd34c03a72d280bc623af5edfc2a28a570c26784 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 16 Apr 2015 11:19:45 +0200 Subject: [PATCH] gnu: Add subread. * gnu/packages/bioinformatics.scm (subread): New variable. --- gnu/packages/bioinformatics.scm | 39 ++

[PATCH 2/3] gnu: hurd-headers: Update to 0.6

From 26324bbff65fbae21cabd7ff87cacd6f70100184 Mon Sep 17 00:00:00 2001 From: Manolis Ragkousis Date: Thu, 16 Apr 2015 13:51:55 +0300 Subject: [PATCH 2/3] gnu: hurd-headers: Update to 0.6 * gnu/packages/hurd.scm (hurd-headers): Update to version 0.6. --- gnu/packages/hurd.scm | 4 ++-- 1 file ch

[PATCH 1/3] gnu: gnumach-headers: Update to 1.5

If you are okay with that, I will push them to master. From 2fc2e412ee60c9b520ea264010c1b060212ddb7f Mon Sep 17 00:00:00 2001 From: Manolis Ragkousis Date: Thu, 16 Apr 2015 13:09:02 +0300 Subject: [PATCH 1/3] gnu: gnumach-headers: Update to 1.5 * gnu/packages/hurd.scm (gnumach-headers): Update to

[PATCH 3/3] gnu: mig: Update to 1.5

From 05a4b3418891609f30ac5ec7c84f1f79b1d99b6c Mon Sep 17 00:00:00 2001 From: Manolis Ragkousis Date: Thu, 16 Apr 2015 14:00:17 +0300 Subject: [PATCH 3/3] gnu: mig: Update to 1.5 * gnu/packages/hurd.scm (mig): Update to version 1.5. --- gnu/packages/hurd.scm | 4 ++-- 1 file changed, 2 insertion

[PATCH] gnu: Add gitolite.

Gitolite is a lightweight tool for managing access control to Git repositories. We use it at the FSF and it works pretty well. AFAICT, I've managed to avoid propogating Perl, but I have to propagate OpenSSH and Git for now. They are referenced in too many scripts in too many ways for a regexp su

Re: [PATCH] gnu: Add Biopython.

Andreas Enge skribis: > On Thu, Apr 16, 2015 at 10:46:11AM +0200, Ricardo Wurmus wrote: >> http://www.biopython.org/DIST/LICENSE > > It starts like this: > "Permission to use, copy, modify, and distribute this software and its > documentation with or without modifications and for any purpose an

Re: LVM support

Tomáš Čech skribis: > On Wed, Apr 15, 2015 at 02:32:14PM +0200, Ludovic Courtès wrote: [...] >>Sorry I’m not really familiar with LVM. > > It's implemented using device mapper but instead of mapping one block > device to another you map one block device to whole group (like > playground where y

Re: [PATCH 1/3] gnu: gnumach-headers: Update to 1.5

Manolis Ragkousis skribis: > If you are okay with that, I will push them to master. Sure, OK for all 3 patches! Ludo’.

Re: [PATCH] gnu: Add Biopython.

On Thu, Apr 16, 2015 at 11:00:30AM +0200, Andreas Enge wrote: It starts like this: "Permission to use, copy, modify, and distribute this software and its documentation with or without modifications and for any purpose and without fee is hereby granted" Does the

Re: [PATCH] gnu: Add Biopython.

Ludovic Courtès writes: > Andreas Enge skribis: > >> On Thu, Apr 16, 2015 at 10:46:11AM +0200, Ricardo Wurmus wrote: >>> http://www.biopython.org/DIST/LICENSE >> >> It starts like this: >> "Permission to use, copy, modify, and distribute this software and its >> documentation with or without m

Re: [PATCH] gnu: Add Biopython.

John Darrington skribis: > On Thu, Apr 16, 2015 at 11:00:30AM +0200, Andreas Enge wrote: > > It starts like this: > "Permission to use, copy, modify, and distribute this software and its > documentation with or without modifications and for any purpose and > without fee

[PATCH] gnu: Add eXpress.

>From 16e9535b2dad21cd585b6da94296f94164103de0 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 16 Apr 2015 15:16:57 +0200 Subject: [PATCH 1/2] gnu: Add bamtools. * gnu/packages/bioinformatics.scm (bamtools): New variable. --- gnu/packages/bioinformatics.scm | 23 +++

Re: [PATCH] gnu: Add Biopython.

On Thu, Apr 16, 2015 at 03:16:36PM +0200, Ludovic Courtès wrote: > Oooh. IOW “without fee” applies to “Permission”, not to “to use, copy, > modify, and distribute”, right? > That makes sense. I think I was fooled in the past by similar wording. Hm, I also read it as "... distribute ... without f

core-updates merge really imminent

l...@gnu.org (Ludovic Courtès) skribis: > If there are no objections, we’ll let Hydra build all of ‘core-updates’ > and merge it afterwards–i.e., within 2-3 days. Ahem, sometimes, days last real long. But we’re getting there! shows that most things

Re: LVM support

On Thu, Apr 16, 2015 at 02:47:52PM +0200, Ludovic Courtès wrote: Tomáš Čech skribis: On Wed, Apr 15, 2015 at 02:32:14PM +0200, Ludovic Courtès wrote: [...] Sorry I’m not really familiar with LVM. It's implemented using device mapper but instead of mapping one block device to another you

[PATCH] gnu: Add libsrtp.

* gnu/packages/telephony.scm (libsrtp): New variable. --- gnu/packages/telephony.scm | 24 1 file changed, 24 insertions(+) diff --git a/gnu/packages/telephony.scm b/gnu/packages/telephony.scm index b9e38c3..4506690 100644 --- a/gnu/packages/telephony.scm +++ b/gnu/packag