On Sun, Dec 14, 2014 at 11:54 PM, Ludovic Courtès wrote:
> Federico Beffa skribis:
>
>> +(alist-cons-before
>> + 'check 'fix-failing-tests
>> + (lambda _
>> + (substitute* (find-files "numpy/linalg/tests"
>> +"test_regression\\
I can not remove packages with the latest guix from git:
~~~
[rwurmus@dev:~/code/guix] (526) $ ./pre-inst-env guix package -r samtools
The following package will be removed:
samtools 1.1 /gnu/store/7jyc8p4cl7mfls9wq3fb7f6m6ipjvgd9-samtools-1.1
Backtrace:
In ice-9/boot-9.scm:
63: 19 [
At Sat, 13 Dec 2014 10:58:44 -0500,
David Thompson wrote:
>
> Tomáš Čech writes:
> > ...
> > @@ -0,0 +1,13 @@
> > +diff -up bullet-2.82-r2704/CMakeLists.txt.orig
> > bullet-2.82-r2704/CMakeLists.txt
> > +--- bullet-2.82-r2704/CMakeLists.txt.orig 2014-12-13 00:09:49.648710180
> > +0100
> >
David Thompson writes:
> 宋文武 writes:
>
>> * gnu/packages/gnome.scm (vte, vte-0): New variables.
>> ---
>> gnu/packages/gnome.scm | 57
>> +-
>> 1 file changed, 56 insertions(+), 1 deletion(-)
>>
>> diff --git a/gnu/packages/gnome.scm b/gnu/packag
* gnu/packages/game-development.scm: New file
* gnu-system.am (GNU_SYSTEM_MODULES): Add it.
---
gnu-system.am | 1 +
gnu/packages/game-development.scm | 47 +++
2 files changed, 48 insertions(+)
create mode 100644 gnu/packages/game-developm
Can we disable the test suite for certain architectures? Or would they
have to be disabled completely?
>>
>> Since it fails the same way on mips64el, I suggest this instead:
>>
>>#:tests? (string=? (or (%current-system) (%current-target-system))
>> "x86_64-l
On Mon, Dec 15, 2014 at 9:41 AM, Federico Beffa wrote:
> On Sun, Dec 14, 2014 at 11:54 PM, Ludovic Courtès wrote:
>> Federico Beffa skribis:
>>
>>> +(alist-cons-before
>>> + 'check 'fix-failing-tests
>>> + (lambda _
>>> + (substitute* (find-files "numpy/linalg/t
Tomas Cech writes:
> I liked that idea and used that approach. Updated patch is
> following...
Pushed, thanks!
--
David Thompson
Web Developer - Free Software Foundation - http://fsf.org
GPG Key: 0FF1D807
Support the FSF: https://fsf.org/donate
Thanks for the review and the suggestions. Attached is an updated patch
for bedtools.
Python has been marked as a native input as it is only required at build
time to run a script that creates shell script wrappers for the various
executables. I hope that's correct.
>From 5d1d383417992369e6fa3f
* gnu/services/xorg.scm (%default-xsessions): New variable.
(xsessions-directory): New procedure.
(slim-service): Add #:sessions parameter.
[slim.cfg]: Honor #:sessions.
(xinitrc): Adjust accordingly.
---
gnu/services/xorg.scm | 50 +++---
1 file
Federico Beffa skribis:
> One more thing: the function causing the test to fail is implemented
> making use of ATLAS. However, the log does not show ATLAS being built
> before numpy (as I would expect given the #:substitutable? #f
> argument). If the machines to which hydra distributes the jobs a
Mark H Weaver skribis:
> From 21388251c029d4193e3e87747c26b2e603c180e1 Mon Sep 17 00:00:00 2001
> From: Mark H Weaver
> Date: Sat, 13 Dec 2014 20:53:59 -0500
> Subject: [PATCH 2/2] gnu: Add xfce4-battery-plugin.
>
> * gnu/packages/xfce.scm (xfce4-battery-plugin): New variable.
I noticed you pus
I think this is due to a subtly misleading file format variation.
If you look at ‘export-paths’, it does:
while there are files to write
write-long-long 1
export-path file
write-long-long 0
‘restore-file-set’ does the opposite, which is to read that long-long to
determine whether the
* gnu/packages/tmux.scm (tmux): Update to 1.9a
---
gnu/packages/tmux.scm | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/tmux.scm b/gnu/packages/tmux.scm
index 636b56e..9cb35bb 100644
--- a/gnu/packages/tmux.scm
+++ b/gnu/packages/tmux.scm
@@ -28,7 +28,7 @@
(d
On Mon, Dec 15, 2014 at 12:19 PM, Ludovic Courtès wrote:
> I think this is due to a subtly misleading file format variation.
>
> If you look at ‘export-paths’, it does:
>
> while there are files to write
> write-long-long 1
> export-path file
> write-long-long 0
>
> ‘restore-file-set’
On Sun, Dec 14, 2014 at 9:28 PM, Ludovic Courtès wrote:
>> +(define* (fix-pth #:key name inputs outputs #:allow-other-keys)
>
> What about calling it ‘rename-pth-file’, which should be more
> descriptive? Also please add a docstring.
Agreed.
>> + (let* ((out (assoc-ref outputs "out"))
>> +
Federico Beffa skribis:
> On Sun, Dec 14, 2014 at 9:28 PM, Ludovic Courtès wrote:
[...]
>> Is PACKAGE.pth a common convention? I mean, does Python (or
>> setuptools?) actually use files called PYTHON.pth?
>
> Yes, the basename of path configuration files with extension .pth does
> not matter.
On Mon, Dec 15, 2014 at 4:20 PM, Ludovic Courtès wrote:
> "Thompson, David" skribis:
>
>> On Mon, Dec 15, 2014 at 12:19 PM, Ludovic Courtès wrote:
>>> I think this is due to a subtly misleading file format variation.
>>>
>>> If you look at ‘export-paths’, it does:
>>>
>>> while there are files
"Thompson, David" skribis:
> On Mon, Dec 15, 2014 at 12:19 PM, Ludovic Courtès wrote:
>> I think this is due to a subtly misleading file format variation.
>>
>> If you look at ‘export-paths’, it does:
>>
>> while there are files to write
>> write-long-long 1
>> export-path file
>> wr
Ricardo Wurmus skribis:
> I can not remove packages with the latest guix from git:
>
> ~~~
> [rwurmus@dev:~/code/guix] (526) $ ./pre-inst-env guix package -r samtools
[...]
> I have only two packages installed: samtools and emacs. Attempting to
> remove either package results in this error.
T
Ricardo Wurmus skribis:
> Can we disable the test suite for certain architectures? Or would they
> have to be disabled completely?
>>>
>>> Since it fails the same way on mips64el, I suggest this instead:
>>>
>>>#:tests? (string=? (or (%current-system) (%current-target-system))
>>>
Tomáš Čech skribis:
> * gnu/packages/tmux.scm (tmux): Update to 1.9a
Applied, thanks!
Ludo’.
Federico Beffa skribis:
> From f4187d31f95e3a65947d77bf267115906ed3816b Mon Sep 17 00:00:00 2001
> From: Federico Beffa
> Date: Wed, 10 Dec 2014 20:36:58 +0100
> Subject: [PATCH 2/4] gnu: Add xcffib
>
> * gnu/packages/python.scm (python-xcffib, python2-xcffib): New variables.
[...]
> +(pro
Federico Beffa skribis:
> From e853d10b595ece0003d838cbfffa65e29a6c2e68 Mon Sep 17 00:00:00 2001
> From: Federico Beffa
> Date: Wed, 10 Dec 2014 21:05:59 +0100
> Subject: [PATCH 3/4] gnu: Add cairocffi.
>
> * gnu/packages/gtk.scm (python-cairocffi, python2-cairocffi): New variables.
[...]
> +
Federico Beffa skribis:
> This one is problematic: for the package to work the user has to define
>
> export GI_TYPELIB_PATH=~/.guix-profile/lib/girepository-1.0
>
> and
>
> export LD_LIBRARY_PATH=~/.guix-profile/lib
>
> The former is required to instruct 'gobject-introspection' where to
> find t
Ludovic Courtès writes:
> To produce that, use ‘write-file’ from (guix serialization):
>
> --8<---cut here---start->8---
> $ ./pre-inst-env guile -c '(use-modules (guix serialization)) (write-file
> "/gnu/store/wy70n5zk8qinxjz0wdk9q2hh1zjfb32j-miscfiles-1.5"
* gnu/packages/lua.scm (luajit): Add -fPIC into CFLAGS and pass it to make.
---
gnu/packages/lua.scm | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/gnu/packages/lua.scm b/gnu/packages/lua.scm
index eda69f9..0b6c4e4 100644
--- a/gnu/packages/lua.scm
+++ b/gnu/packages/lua.scm
Amirouche Boubekki skribis:
> My machine is kind of recent, and previously with other distro I had
> all sort of trouble with uefi. Not this time, I don't know what is the
> configuration of guix, I've just setup my bios to avoid uefi.
Yeah, Guix doesn’t support UEFI. (I’m not sure exactly what
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