Re: [PATCH] gnu: add sparta-dsmc

2016-04-22 Thread Lukas Gradl
On Tue, Apr 05, 2016 at 08:21:35PM +0300, Efraim Flashner wrote: > On Tue, Apr 05, 2016 at 12:04:56PM -0500, Lukas Gradl wrote: > > On Tue, Apr 05, 2016 at 04:26:59AM -0400, Leo Famulari wrote: > > > On Mon, Apr 04, 2016 at 03:55:51PM -0500, Lukas Gradl wrote: > > > > Hello Guix! > > > > > > > > A

[PATCH] gnu: Add Red Eclipse.

2016-04-22 Thread Kei Yamashita
With much help from others on IRC, this patch works! If necessary or preferable, please suggest changes to make this patch more maintainable in the long run.

Re: [PATCH 0/2] Update imlib2 and patch against CVE-2016-4024

2016-04-22 Thread Leo Famulari
On Fri, Apr 22, 2016 at 11:20:17PM -0400, Mark H Weaver wrote: > Leo Famulari writes: > > > This applies from a patch from imlib2's source code repository. > > > > The change fixes an integer overflow on 32-bit machines. The upstream > > says: > > > > Security implications: > > *) for 32-bit mach

Re: [PATCH] gnu: powertop: Patch absolute file names.

2016-04-22 Thread Mark H Weaver
Mathieu Lirzin writes: > * gnu/packages/linux.scm (powertop)[inputs]: Add kmod. > [arguments]: Patch absolute file names. Before that launching powertop > was failing because 'modprobe' was not found. By convention, we don't include rationales in the commit log. When needed, they should go in

Re: [PATCH 0/1] Update OpenLDAP, fixing CVE-2015-6908

2016-04-22 Thread Mark H Weaver
Leo Famulari writes: > There is a remote denial of service bug in OpenLDAP in version 2.4.42 > and earlier [0]. > > This patch updates OpenLDAP to the latest version. > > This change will require several hundred packages to be rebuilt. Should > it go on security-updates? Your advice requested...

Re: [PATCH 2/2] gnu: bitlbee: Incorporate upstream pre-release patches.

2016-04-22 Thread Mark H Weaver
Andy Wingo writes: > * gnu/packages/messaging.scm (%bitlbee-buddy-nick-change-patch): > (%bitlbee-always-use-nicks-patch): New variables. > (bitlbee): Add new patches. Okay, please push. Thanks! Mark

Re: [PATCH 1/2] gnu: bitlbee: Update to 3.4.2.

2016-04-22 Thread Mark H Weaver
Andy Wingo writes: > * gnu/packages/messaging.scm (bitlbee): Update to 3.4.2. Looks good to me, please push. Thanks! Mark

Re: [PATCH 0/2] Update imlib2 and patch against CVE-2016-4024

2016-04-22 Thread Mark H Weaver
Leo Famulari writes: > This applies from a patch from imlib2's source code repository. > > The change fixes an integer overflow on 32-bit machines. The upstream > says: > > Security implications: > *) for 32-bit machines: insufficient heap allocation and heap overwrite > in many image loaders, wi

Re: [PATCH] Add junit.

2016-04-22 Thread Ricardo Wurmus
Eric Bavier writes: > On 2016-04-22 09:16, Ricardo Wurmus wrote: >> Hi Guix, >> >> here’s a first batch of patches for Java libraries. Many Java packages >> depend on JUnit, so that’s where I started. “hamcrest-core” is just a >> small part of the whole hamcrest library, but it’s enough to bu

Re: [PATCH] Add junit.

2016-04-22 Thread Eric Bavier
On 2016-04-22 09:16, Ricardo Wurmus wrote: Hi Guix, here’s a first batch of patches for Java libraries. Many Java packages depend on JUnit, so that’s where I started. “hamcrest-core” is just a small part of the whole hamcrest library, but it’s enough to build JUnit. [...] + (add-befo

[PATCH] Add junit.

2016-04-22 Thread Ricardo Wurmus
Hi Guix, here’s a first batch of patches for Java libraries. Many Java packages depend on JUnit, so that’s where I started. “hamcrest-core” is just a small part of the whole hamcrest library, but it’s enough to build JUnit. I tested JUnit previously with the log4j-api package, but I cannot subm

Re: [PATCH] Add vcflib.

2016-04-22 Thread Ricardo Wurmus
Roel Janssen writes: > Ricardo Wurmus writes: > >> Roel Janssen writes: >> >>> From f0cb8c476e902e3351988f7c278b3682837c8cce Mon Sep 17 00:00:00 2001 >>> From: Roel Janssen >>> Date: Tue, 22 Mar 2016 15:47:06 +0100 >>> Subject: [PATCH 5/8] gnu: Add filevercmp. >> >>> * gnu/packages/bioinformat

Re: [PATCH] Add vcflib.

2016-04-22 Thread Roel Janssen
>From 8808f3abda32feca92ec8e2bb403ba705ef4b7b7 Mon Sep 17 00:00:00 2001 From: Roel Janssen Date: Fri, 22 Apr 2016 10:02:37 +0200 Subject: [PATCH] gnu: Add filevercmp. * gnu/packages/bioinformatics.scm (filevercmp): New variable. --- gnu/packages/bioinformatics.scm | 28 ++

Re: [PATCH] Add vcflib.

2016-04-22 Thread Roel Janssen
>From e7d84066efe5857581c1d03be5dfda95c1541462 Mon Sep 17 00:00:00 2001 From: Roel Janssen Date: Fri, 22 Apr 2016 09:35:47 +0200 Subject: [PATCH] gnu: Add multichoose. * gnu/packages/bioinformatics.scm (multichoose): New variable. --- gnu/packages/bioinformatics.scm | 35

Re: [PATCH] Add vcflib.

2016-04-22 Thread Roel Janssen
>From 58ecd585411a8981f7cefdb6928e199ef77de476 Mon Sep 17 00:00:00 2001 From: Roel Janssen Date: Fri, 22 Apr 2016 09:15:52 +0200 Subject: [PATCH] gnu: Add tabixpp. * gnu/packages/bioinformatics.scm (tabixpp): New variable. --- gnu/packages/bioinformatics.scm | 34