Re: [gmx-users] mdrun_mpi error Signal: Segmentation fault

you did the same thing and the > system collapsed or exploded (you can see that reading the log file: if this > is the cause, you should see problems regarding water). > > Cheers, > Annalisa > > 2009/4/13 Justin A. Lemkul >> >> >> nam kim wrote: >&g

[gmx-users] gromac 4.0.4 g utilities freeze the OS with Out of Memory

I have experienced OS (RedHat Enterprise) for a hour or 3 hours whiling using gromacs 4.0.4 g-utilities such as g_vanhove. My log error messages are: Out of Memory g_vanhove_mpi Out of Memory g_anaeig_mpi Are g-utilites of Gromacs 4.0.4 buggy? Thanks -Nam __

[gmx-users] mdrun_mpi error Signal: Segmentation fault

I have segmentation fault error while running mdrun_mpi( gromacs 4.0.4). I have installed gromacs 4.0.4 two month ago and been working fine. Today, I just got Segment errors. Rebooting does not much help. Here is log: [rd:06790] *** Process received signal *** [d:06790] Signal: Segmentation fault

Re: [gmx-users] mdrun_mpi error Signal: Segmentation fault

process crashes around 100 steps out of 1000 requested. On Fri, Apr 10, 2009 at 4:32 PM, Justin A. Lemkul wrote: > > > nam kim wrote: >> >> I have segmentation fault error while running mdrun_mpi( gromacs 4.0.4). >> I have installed gromacs 4.0.4 two month ago and bee