[gmx-users] Genbox center of box

2013-06-10 Thread Matt Bawn
. Can anyone let me know what I'm doing wrong please? Thanks, -- Dr Matt Bawn Research Associate Brooklyn** College CUNY -- gmx-users mailing listgmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Su

[gmx-users] Re: Genbox center of box

2013-06-10 Thread Matt Bawn
>Can you please provide your exact sequence of commands (up to, and including, >genbox) and the exact error message (copied and pasted from the terminal)? >Which version of Gromacs are you using? I'm using Gromacs 4.5.5 1 pdb2gmx -f 2CCA_dw.pdb -o 2CCA_processed.gro -water spce -merge all FF

[gmx-users] Re: Genbox center of box

2013-06-10 Thread Matt Bawn
>I have never seen such a prompt, and I cannot reproduce the problem with version >4.5.5 on my machine. Did you install from source, or from some external binary >or package manager? Are you running Gromacs directly, or are you using any GUI >interface of any sort? Does the problem persist with

[gmx-users] Re: Genbox center of box

2013-06-11 Thread Matt Bawn
ml-node+s5086n5009004...@n6.nabble.com> wrote: > > > On 6/10/13 3:26 PM, Matt Bawn wrote: > > >> I have never seen such a prompt, and I cannot reproduce the problem > with > > version > >> 4.5.5 on my machine. Did you install from source, or from some