bharat gupta wrote:
It means that rmsd plot is stable .. I am trying to run the trajectory
in windows using VMD and for that i followed what was said in past
thread of gmx discussion list but I am not able to run the trajectory
and for that I have posted another question regarding that jus 5
It means that rmsd plot is stable .. I am trying to run the trajectory in
windows using VMD and for that i followed what was said in past thread of
gmx discussion list but I am not able to run the trajectory and for that I
have posted another question regarding that jus 5 mins back..
Also if u ca
bharat gupta wrote:
I generated this graph using xyplot since I was not able to install
xmgrace on windows platform .. also I want to one more thing ... that I
calculated the rmsd and rmsd_xtal graph .. I found them to be same and
the fluctuations in graph is same for 0 to 1.5 nm and then l
bharat gupta wrote:
Hi,
After completing my simulation , I have generated the potential.xvg
file and also I generated the average of the potential for the whole
simulation using g_analyze. But when I open the file average.avg I shows
me the same graph as that of potential.xvg but with red
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