On 06/17/2011 06:36 PM, bharat gupta wrote:
I took all the parameters of Ptyr from amber parameter database and
followed what was said in the documentation.
The fact that you seem to change the capitalization of "PTYR" every time
you type it does not inspire confidence that you've taken due ca
I took all the parameters of Ptyr from amber parameter database and followed
what was said in the documentation. Shall mail the changes made for topology
On Fri, Jun 17, 2011 at 5:17 PM, Mark Abraham wrote:
> On 06/17/2011 12:18 PM, bharat gupta wrote:
>
>> thanks.. I fixed the problem by using
On 06/17/2011 12:18 PM, bharat gupta wrote:
thanks.. I fixed the problem by using the command execstack -c filename
but I have another issue .. I am am preparing the structure for
simulation which is a docked complex containing Phospharylated
tyrosine. I am using Amber 99 force field and upd
thanks.. I fixed the problem by using the command execstack -c filename
but I have another issue .. I am am preparing the structure for simulation
which is a docked complex containing Phospharylated tyrosine. I am using
Amber 99 force field and update the residuetypes.dat, aminoacid.rtp,
ffbonde
Someone with some more in depth knowledge will hopefully pipe up, but until
then there are some things you can read up on and see if it will solve your
issue.
Google is your friend.
Put "error while loading shared libraries: libgmx.so.6: Permission denied" into
it, and you get a number of top
5 matches
Mail list logo
