Re: [gmx-users] Re: Genbox center of box

2013-06-10 Thread Justin Lemkul
On 6/10/13 3:26 PM, Matt Bawn wrote: I have never seen such a prompt, and I cannot reproduce the problem with version 4.5.5 on my machine. Did you install from source, or from some external binary or package manager? Are you running Gromacs directly, or are you using any GUI interface o

Re: [gmx-users] Re: Genbox center of box

2013-06-10 Thread Justin Lemkul
On 6/10/13 2:33 PM, Matt Bawn wrote: Can you please provide your exact sequence of commands (up to, and including, genbox) and the exact error message (copied and pasted from the terminal)? Which version of Gromacs are you using? I'm using Gromacs 4.5.5 1 pdb2gmx -f 2CCA_dw.pdb -o 2CCA_p