Hi Bing,
You do want to use genconf for that (the way you use it, editconf
scales the coordinates).
genconf -f xxx.pdb -nbox 2 2 1 -o zzz.pdb
The thing to make sure is that all molecules are whole before
processing them with genconf. The other possibility is to use editconf
to translate a few co
Dear all,
I want to extend the membrane into 512 POPC with the starting structure of
128 POPC. I 've used :-
editconf -f xxx.pdb -scale 2 2 1 -o zzz.pdb.
I noticed that the pdb file that generated by editconf have only 1 set of
128 popc. Using vmd, the extended structure is in pieces, the no bond
b
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