> From: [EMAIL PROTECTED]
> To: gmx-users@gromacs.org
> Subject: [gmx-users] simulations using structureless surface-2
> Date: Wed, 1 Aug 2007 16:10:36 +0200
>
> Dear Erik,
> The wall which I want to introduce will interact wi
9:54 AM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] simulations using structureless surface-2
There was a tutorial on implementing a z-dependent electric potential
on the gromacs web page not that long ago. It didn't seem that
difficult. That should serve as a good starting
27 jul 2007 kl. 09.53 skrev Erik Marklund:
There was a tutorial on implementing a z-dependent electric
potential on the gromacs web page not that long ago. It didn't seem
that difficult. That should serve as a good starting point for your
wall o' carbon.
...namely http://wiki.gromacs.o
There was a tutorial on implementing a z-dependent electric potential
on the gromacs web page not that long ago. It didn't seem that
difficult. That should serve as a good starting point for your wall
o' carbon.
/Erik
27 jul 2007 kl. 01.56 skrev Mark Abraham:
Dear gmx users,
my apologies
> Dear gmx users,
> my apologies for the previous post. I will try to rephrase my problem.
>
> Is it possible to introduce a plane in a particular direction, for example
> in z direction, where molecules interact with it only based on the
> perpendicular distance between the molecules and the plane
3901
-
-Original Message-
From: Mark Abraham [mailto:[EMAIL PROTECTED]
Sent: Wednesday, July 25, 2007 3:54 PM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] simulations using structureless surface
singh wrote:
>
>
singh wrote:
Dear Gromacs users,
I want to simulate water in slit like pores where the pore surface can
be represented by a plane in z direction, interacting with water
molecules using 9-3 potential (or any other) but rather than using
particles in the surface and thus the distances bet
Dear Gromacs users,
I want to simulate water in slit like pores where the pore surface can be
represented by a plane in z direction, interacting with water molecules
using 9-3 potential (or any other) but rather than using particles in the
surface and thus the distances between particles in
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