Dear Gromacs users,
I want to simulate water in slit like pores where the pore surface can be represented by a plane in z direction, interacting with water molecules using 9-3 potential (or any other) but rather than using particles in the surface and thus the distances between particles in the surface and water, I want to use only the distance between water and surface in z direction only (a structure less surface). In the mailing list , I found some reference to the -glass option in mdrun but not much information is available regarding it except that it is only for special long range corrections. I would like to know the possibilities of simulating such systems using gromacs. With Regards, Gurpreet Singh
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