Re: [gmx-users] normal mode analysis (size issue)

Hi, On Jun 19, 2007, at 5:26 PM, Liwei Li wrote: I want to carry out normal mode analysis on a large protein (about 10,000 atoms) without using coarse grain approximations. Amber is out of the question since it can only handle about 5,000 atoms for NMA. I am wondering if GROMACS can deal w

[gmx-users] normal mode analysis (size issue)

Hi, I want to carry out normal mode analysis on a large protein (about 10,000 atoms) without using coarse grain approximations. Amber is out of the question since it can only handle about 5,000 atoms for NMA. I am wondering if GROMACS can deal with this assuming running on a 64-bit machine with 8