Re: [gmx-users] free energy (coordinates file)

2012-01-08 Thread Mark Abraham
On 7/01/2012 9:12 PM, parto haghighi wrote: Dear GMX users, I have a question about 6th gromacs tutorial. That's not a useful description, because nobody else knows what list you're looking at. A URL is much better. I have to perform 5 steps of calculation contain: 1) EM-1 2) EM-2 3) NVT 4)

[gmx-users] free energy (coordinates file)

2012-01-07 Thread parto haghighi
Dear GMX users, I have a question about 6th gromacs tutorial. I have to perform 5 steps of calculation contain: 1) EM-1 2) EM-2 3) NVT 4) NPT 5) Product MD for each Lambda value from 0 up to 1. I have a .gro file contains initial coordinates of my system : drg.gro For lambda = 0.00 I have done 5 st