Dear GMX users, I have a question about 6th gromacs tutorial. I have to perform 5 steps of calculation contain: 1) EM-1 2) EM-2 3) NVT 4) NPT 5) Product MD for each Lambda value from 0 up to 1. I have a .gro file contains initial coordinates of my system : drg.gro For lambda = 0.00 I have done 5 steps (above) and its results is : md0.gro (from MD-Production) my question is should I use md0.gro for next calculations ( lambda = 0.05) or I have to apply drg.gro file again? Thank in advance. P.Haghighi
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