Re: [gmx-users] define atoms

shahrbanoo karbalaee wrote: Dear justin how do I know,what is the name ofatom 17 in rmsf table of backbone group.? It should be whatever the 17th atom in the analyzed group is. -Justin # g_rmsf -f md.xtc -s md.tpr -o traj_rmsfbackbon.xvg -ox traj_avgazrmsfbackbon.pdb # # g_rmsf is par

[gmx-users] define atoms

Dear justin how do I know,what is the name ofatom 17 in rmsf table of backbone group.? # g_rmsf -f md.xtc -s md.tpr -o traj_rmsfbackbon.xvg -ox traj_avgazrmsfbackbon.pdb # # g_rmsf is part of G R O M A C S: # # God Rules Over Mankind, Animals, Cosmos and Such # @title "RMS fluctuation" @

Re: [gmx-users] define atoms

shahrbanoo karbalaee wrote: Dear mark excuse me. I attempt it again.in analysis result of md peptide I have the table t consist of atoms number column and the other column rmsd(nm).I want to know what is thename of atom which define number 12 in backbone group ?Is it NCC for example relat

[gmx-users] define atoms

Dear mark excuse me. I attempt it again.in analysis result of md peptide I have the table t consist of atoms number column and the other column rmsd(nm).I want to know what is thename of atom which define number 12 in backbone group ?Is it NCC for example related to ser or another aminoacid