Re: [gmx-users] decomposition

2010-07-26 Thread Carsten Kutzner
Hi Jacopo, from somewhere the information about the 7 nodes must have come. What are the exact commands you used? What MPI are you using? Carsten On Jul 26, 2010, at 12:35 PM, Jacopo Sgrignani wrote: > Dear all > i'm trying to run a MD simulation using domain decomposition but after two > days

[gmx-users] decomposition

2010-07-26 Thread Jacopo Sgrignani
Dear all i'm trying to run a MD simulation using domain decomposition but after two days i'm only able to get this error: There is no domain decomposition for 7 nodes that is compatible with the given box and a minimum cell size of 2.37175 nm Change the number of nodes or mdrun option -rcon or -d