Hi Jacopo, from somewhere the information about the 7 nodes must have come. What are the exact commands you used? What MPI are you using?
Carsten On Jul 26, 2010, at 12:35 PM, Jacopo Sgrignani wrote: > Dear all > i'm trying to run a MD simulation using domain decomposition but after two > days i'm only able to get this error: > > > There is no domain decomposition for 7 nodes that is compatible with the > given box and a minimum cell size of 2.37175 nm > Change the number of nodes or mdrun option -rcon or -dds or your LINCS > settings > Look in the log file for details on the domain decomposition > > > I don't select a number of nodes but i use the default options, but the > simulation does not run. > So could you give me advices to run with domain decomp, or where can I > find exaples about this? > > Thanks a lot > > Jacopo > > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at http://www.gromacs.org/search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/mailing_lists/users.php -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/mailing_lists/users.php
