Re: [gmx-users] Error in trjconv

Sai Pooja wrote: Hi, While using trjconv I get this error: VMD_PLUGIN_PATH not set. Using default location: /usr/local/lib/vmd/plugins/*/molfile No VMD Plugins found Set the environment variable VMD_PLUGIN_PATH to the molfile folder within the VMD installation. The architecture (e.g. 32

[gmx-users] Error in trjconv

Hi, While using trjconv I get this error: VMD_PLUGIN_PATH not set. Using default location: /usr/local/lib/vmd/plugins/*/molfile No VMD Plugins found Set the environment variable VMD_PLUGIN_PATH to the molfile folder within the VMD installation. The architecture (e.g. 32bit versus 64bit) of Groma

Re: [gmx-users] Error in trjconv

Ah, sure, now we know! Well, actually I almost confirmed my suspicion, just searching for libc.so.6 in the archives. But first, you might want to read http://www.catb.org/~esr/faqs/smart-questions.html Then, you can continue with http://www.gromacs.org/pipermail/gmx-users/2007-November/030605.html

[gmx-users] Error in trjconv

hi trjconv_mpi -f dimer_md.trr -o dimer_md.xtc (command which i used) Linux (Platform) Cluster machine (30 nodes, 1 node = 4 processor) again i want you to know that my molecule is dimer with a small ligand which gives error. my molecule alone dosent gives error thanks Parthiban > Hi Parthiban

Re: [gmx-users] Error in trjconv

Hi Parthiban, Do you have a particular reason for using the MPI version of trjconv? Do you have the same error with the standard version? Cheers, Tsjerk On Mon, Aug 18, 2008 at 6:12 AM, M.Parthiban <[EMAIL PROTECTED]> wrote: > Hi > > I am encountering an error in file conversion from .trr file

[gmx-users] Error in trjconv

Hi I am encountering an error in file conversion from .trr file to .xtc file using trjconv command, and this is for a dimer and a ligand bound complex simulation. can you help me in knowing or to rectify this error which follows., Thank you in advance Parthiban ==