Re: [gmx-users] %exist of hydrogen bonds + No -map specified!

leila karami wrote: Dear Justin I'm using your script for obtaining %exist of hydrogen bonds. When I use ./hb.pl structure.pdb -map hbmap.xpm -index hbond.ndx, I encountered with No -map specified! I noted to points being at the begining of script: # 1. coordinate file (for atom naming

[gmx-users] %exist of hydrogen bonds + No -map specified!

Dear Justin I'm using your script for obtaining %exist of hydrogen bonds. When I use ./hb.pl structure.pdb -map hbmap.xpm -index hbond.ndx, I encountered with No -map specified! I noted to points being at the begining of script: # 1. coordinate file (for atom naming) - MUST be a .pdb file