Re: [Freesurfer] occipital lobe WM errors

e, Thanks so much. If it would help, I could upload another subject, perhaps one with worse segmentation in the occipital lobe. I could also upload a raw T1 image sequence (Nifiti) Matt On Wed, Aug 6, 2014 at 9:48 AM, Tirrell, Lee mailto:ltirr...@mgh.harvard.edu>> wrote: Hi Matt, I'

Re: [Freesurfer] problem downloading freesurfer

It appears to work for me. Try this link to download directly: ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/5.3.0/freesurfer-Darwin-lion-stable-pub-v5.3.0.dmg Once downloaded, go here for installation notes: http://surfer.nmr.mgh.harvard.edu/fswiki/MacOsInstall This should work on OSX Ma

Re: [Freesurfer] no improvement for recon-all result after edits

Hi Jidan, Can you upload one of these subjects so I can take a look? You can use these options to upload data: https://surfer.nmr.mgh.harvard.edu/fswiki/FtpFileExchange https://www.nmr.mgh.harvard.edu/facility/filedrop/index.html Best, Lee From: freesurfer-b

Re: [Freesurfer] sequence advice for GE 750 & 8-channel coil

Hi Antonio, You can find information on recommended scanning protocols here: http://martinos.org/~andre/ These scans are designed to have good contrast between gray and white matter, so that results can be more easily processed in FreeSurfer. Although this page is mostly focused on Siemens scanne

Re: [Freesurfer] longitudinal base template creation with one timepoint

Hi Tracy, You can check out this page , on our FreeSurferWiki to find out more information on longitudinal processing: https://surfer.nmr.mgh.harvard.edu/fswiki/LongitudinalProcessing Also, our database of publications related to FreeSurfer in general is here: https://www.zotero.org/freesurfer B