[Freesurfer] URGENT: Error in analyse

2014-05-26 Thread Saloni Sharma
Dear Freesurfers, So I have followed all the instructions given on your website in order to use qdec. When i analyse the images only using a file group.levels that defines the two groups I'm comparing the analysis runs fine and gives me results, but when I add gender, for instance, as a discrete f

Re: [Freesurfer] URGENT: Error in analyse

2014-05-26 Thread Saloni Sharma
our subjects? > > cheers > Bruce > On Mon, 26 May 2014, Saloni Sharma wrote: > > > Dear Freesurfers, > > > > So I have followed all the instructions given on your website in order to > > use qdec. When i analyse the images only using a file group.levels that > > de

Re: [Freesurfer] URGENT: Error in analyse

2014-05-26 Thread Saloni Sharma
Doug or Nick to reply, but you might > send your qdec file and the group.levels files > > sorry > Bruce > > On Mon, 26 May 2014, Saloni Sharma wrote: > > > Hey Bruce, > > > > Yes, that directory exists, as I said if I only choose groups(high stress > > and lo

Re: [Freesurfer] URGENT: Error in analyse

2014-05-29 Thread Saloni Sharma
hange the name of the SUBJECT directory or change the > subject id you are giving to mri_glmfit. > > HTH > D > > > > On 05/28/2014 05:17 PM, Saloni Sharma wrote: > > Same error despite having run recon-qcache again. > > > > > > On 28 May 2014 21:28, Sa

[Freesurfer] Orthogonalising covariates

2014-06-01 Thread Saloni Sharma
Dear Freesurfers, does qdec allows you to orthogonalise one covariate relative to the other? Regards, Saloni ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in thi