Dear Freesurfer team,
We calculate our T1 images from quantitative sequences. I have tried to
process one of these images with the FS pipeline and it finishes apparently
without errors. However, when I try to load any of the .mgz files in
Freeview, the images appears as a white box. Changing the sl
Feb 2, 2015, at 7:38 AM, Pernille Iversen wrote:
>
> > Dear Freesurfer team,
> > We calculate our T1 images from quantitative sequences. I have tried to
> process one of these images with the FS pipeline and it finishes apparently
> without errors. However, when I try to load an
Hi
After running several subjects (using trio siemens dicomfiles) with
recon-all -all -nowmsa, we have observed an apparent shift of approximately
one voxel to the left of the pial surface as compared to the brainmask.mgz
in the TkMedit coronal view. This was observed in all of our subjects. Do
you
Hi,
In the release notes for version 4.4.0 it says that "The -randomness flag
can be used to allow usage of a random seed", however, running the following
command:
recon-all -all -nowmsa -randomness -subjid f4168_1r
gives the following error:
ERROR: Flag -randomness unrecognized.
Is there anoth
eleaseNotes page has been updated.
>
> Nick
>
>
>
> On Thu, 2009-07-23 at 09:52 +0200, Pernille Iversen wrote:
> > Hi,
> > In the release notes for version 4.4.0 it says that "The -randomness
> > flag can be used to allow usage of a random seed", how
Dear all,
We have created our own atlas based on several subjects. We have the atlas
in analyze volume files and would like to know if we can somehow convert
these files into the .gcs format without having to go through all the manual
steps of creating a template and labels.
Thanks,
Pernille
