This is normal. mri_ca_register can take 10 hours. To see if it is still
running, open another terminal and type top, you should see all the
running processes. Check
http://surfer.nmr.mgh.harvard.edu/fswiki/recon_2dall to see approximate
run times for each step.
Mike
[EMAIL PROTECTED] wrote:
Hi Dahlia,
I'm not sure if this will work, but try adding --annotation aparc.a2005s
This tells mri_annotation2label to use the 2005 labels.
This flag seems to be missing from the fswiki but is mentioned in
mri_annotation2label --help
I got 78 of 82 labels this way, the other four say --- skippin
You can get brain.mgz by converting the COR files in
/space/ventzl/1/users/SUBJECTS_DIR/mano001/mri/brain to mgz using
mri_convert --in_type cor --out_type mgz
Robert Levy wrote:
Hi Doug,
I just got around to looking at this problem again and trying what you
had suggested (link brain.mgz to
Hi,
I'm having a problem with stxgrinder-sess. Here is some relevant info:
tkmeg:mikeho[82] source /usr/local/freesurfer/nmr-dev-env
SUBJECTS_DIR/space/canada/5/users/mikeho/subjects
FUNCTIONALS_DIR /space/canada/5/users/mikeho/brainmapper
[tkmeg:~] (nmr-dev-env) which stxgrinder-sess
/usr/lo
