Hi,
I'm having a problem with stxgrinder-sess. Here is some relevant info:
tkmeg:mikeho[82] source /usr/local/freesurfer/nmr-dev-env
SUBJECTS_DIR /space/canada/5/users/mikeho/subjects
FUNCTIONALS_DIR /space/canada/5/users/mikeho/brainmapper
[tkmeg:~] (nmr-dev-env) which stxgrinder-sess
/usr/local/freesurfer/dev/fsfast/bin/stxgrinder-sess
[tkmeg:~] (nmr-dev-env) cd /space/canada/5/users/mikeho/vtw_study
When I type:
[tkmeg:vtw_study] (nmr-dev-env) stxgrinder-sess -contrast
words_vs_nonwords -analysis vtw_eng_syn_vis_all -sf sessid -df sesspar
stxgrinder-sess logfile is
/autofs/space/canada_005/users/mikeho/vtw_study/log/stxgrinder-sess.060110114213.log
nthsess = 1 vtw006_eng_syn_vis time=0.012953 --------
/autofs/space/canada_005/users/mikeho/brainmapper/vtw006_eng_syn_vis
contrast words_vs_nonwords (time=0.135684)
slice 0 ??? Error using ==> fmri_svbfile
Too many output arguments.
Error in ==> /usr/local/freesurfer/dev/fsfast/toolbox/fast_svbslice.m
On line 35 ==> err = fmri_svbfile(y,fname);
Error in ==>
/usr/local/freesurfer/dev/fsfast/toolbox/fast_stxgrinder2_sess.m
On line 167 ==> fast_svbslice(tmp,cesstem,slice,'',mristruct);
omnibus contrasts f and fsig can be generated, however, nothing is
generated in the vtw_eng_syn_vis_all contrast directory. I get the same
error with the bert tutorial data, and in both std and dev environments.
Oddly (or maybe not) stxgrinder0-sess works.
Thanks.
Mike Ho
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