I am also experiencing same problem.
I tried to change ct., but when I change the extension to ctf,It also give
errors as below.
Error:CTF file
'/usr/local/freesurfer/bin/segmentSubjectT1_autoEstimateAlveusML.ctf' failed to
open for 'Read' access. Error message: 'Open a zip file for read/modify
Dear Freesurfer + CUDA users,
I am trying to run cuda-enabled recon-all procedure.My system is Ubuntu 14.04,
NVIDIA M4000, with freesurfer stable beta 20161028 + CUDA 8.0 driver.
I get the error message like below.
$ recon-all -all -s DEP030 -use-gpu
Testing for CUDA device:
nvcc: NVIDIA (R) Cu
Dear freesurfer developers,
Anybody know which CUDAversion is the latest one supported by freesurfer?
I just found the thread below. it's written in 2014, but experiences same
error.Successful detectcuda command, but core dump during very first step of
recon-all.
https://www.mail-archive.com/fre
Dear Freesurfer Developers,
6.0 Stable in OS X seems to have some bugs.
Monte-Carlo simulation works fine in 10mm FWMH, but error shows up in 5mm or
0mm as below.
###Error Code###
ERROR: CSDread(): could not open
/Applications/freesurfer/average/mult-comp-cor/fsaverage/lh/cortex/fwhm4/abs/th13/mc
The version downloaded in offical page. 6.0 stable for OS X.
On Mar 20, 2017, at 11:02 AM, Douglas Greve
wrote:what version of FS are you running?
On 3/18/17 11:41 AM, June Kang wrote:Dear Freesurfer Developers,
6.0 Stable in OS X seems to have some bugs.
Monte-Carlo simulation works fine in
The version downloaded in offical page. 6.0 stable for OS X.
> On Mar 20, 2017, at 11:02 AM, Douglas Greve wrote:
>
> what version of FS are you running?
>
> On 3/18/17 11:41 AM, June Kang wrote:
>> Dear Freesurfer Developers,
>>
>>
>> 6.0
External Email - Use Caution
In the visualization step of Tracula processing, freeview -tv
merged_avg33_mni_bbr shows some tracts with very high threshold (i.e. 171),
which make them look like the reconstruction-failed ones.
The tracts failed to reconstruction usually show thresh
rate stats at a different threshold, you can find the dmri_pathstats
> command line in trac-all.log and add the --pthr option (the default 20% would
> be --pthr .2).
>
> On Nov 1, 2018 9:01 PM, June Kang <mailto:cn...@korea.ac.kr>> wrote:
> External Email - Use Caution
NR, motion, population with more morphological variability, etc.?
>
> a.y
> From: freesurfer-boun...@nmr.mgh.harvard.edu
> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>
> <mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> on behalf of June Kang
> mailto:cn...@korea.ac.kr&
External Email - Use Caution
Hello,According to the FAQ for earlier version of Freesurfer (maybe 6.x), the
instruction is below.First you must run only -autorecon1 like this:recon-all
-autorecon1 -noskullstrip -s Then you will have to make a symbolic link
or copy T1.mgz to brain
External Email - Use CautionI am away till 27th Feburary in a conference, and will be delayed in responding to email.Thank you for your understanding학회 참석으로 인해 27일까지 메일 회신이 다소 늦을 수 있습니다.양해 부탁드립니다.
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