To answer your question more completely, we're trying to compare two
files with the following headers:
Freesurfer segmentation:
height = 256
width = 256
depth = 256
nframe = 1
imnr0 = 1
imnr1 = 256
xnum = 256
ynum = 256
fov = 256.00
thick = 1.00
xstart = -128.00
xend = 128.0
The Volumes module in 3D slicer (v3) will load mgz files. You can use
the Model Maker module to create models of your structures using the
FreeSurfer label codes.
http://www.slicer.org/
_
Jeffrey J. Dewey
Center for Neurological Imaging
Brigham and Women's Hospital
Hi all,
I'm using mri_compute_seg_overlap to calculate dice coefficients for two asegs,
and the numbers look reasonable. However, for two of my comparisons,
mri_compute_overlap reports zero overlapping voxels between the segmentations.
Do these two commands compute overlapping voxels in a dif
