[Freesurfer] apply CVS morph to a list of coordinates

2017-02-10 Thread Donos, Cristian
Hi, I have registered a patient’s MRI over the ColinN27 with mri_cvs_register and now i need convert an electrode (or voxel) coordinate from the subject’s space to the N27 space. I found an old post in the mailing list, but it did not work for me. The coords.txt file is just one line containing

Re: [Freesurfer] apply CVS morph to a list of coordinates

2017-02-21 Thread Donos, Cristian
Hi Lilla, It’ s a Mac Pro with 64Gb Ram. Best, Cristian ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to wh

Re: [Freesurfer] apply CVS morph to a list of coordinates

2017-02-28 Thread Donos, Cristian
morph applied in 1.86923 minutes On Feb 21, 2017, at 11:10 AM, Donos, Cristian mailto:cristian.do...@uth.tmc.edu>> wrote: Hi Lilla, It’ s a Mac Pro with 64Gb Ram. Best, Cristian ___ Freesurfer mailing list Freesurfer@nmr.mgh.harva

Re: [Freesurfer] apply CVS morph to a list of coordinates

2017-03-02 Thread Donos, Cristian
I have uploaded the files i am using. After updating to Freesurfer 6.0, i was able to use fullCSVmorph.tm3d, but the coordinates in the output file remain unchanged. The other tm3d files in my csv folder return 1 1 1 for each point in the input txt file. Best, Cristian