[Freesurfer] (no subject)

2011-02-14 Thread Angela Cosentino
Salve! Sto utilizzando freesurfer per un lavoro di tesi e ho incontrato problemi per la fase di preprocessing. Allora  ho ricevuto dei file in fomrato ".nii" e li ho converiti con il comando: "recon-all -i "file_name.nii" -s "nuovo_nome". Ora dovrei processarli, tramite il comando "recon-all -i

[Freesurfer] (no subject)

2011-03-12 Thread Angela Cosentino
Hi! How can I view the cortical thickness' misure? ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is inte

Re: [Freesurfer] (no subject)

2011-03-12 Thread Angela Cosentino
to: Re: [Freesurfer] (no subject) A: "Angela Cosentino" Cc: freesurfer@nmr.mgh.harvard.edu Data: Sabato 12 marzo 2011, 22:06 you can load the lh.thickness (if you are viewing the left hemisphere surface) or rh.thickness (if you are viewing the right hemisphere surface) in tksurfer either usi

[Freesurfer] I: Re: (no subject)

2011-03-13 Thread Angela Cosentino
Sorry. The 2 lines are red and yellow. But probably nothing changes. Sorry again! --- Dom 13/3/11, Angela Cosentino ha scritto: Da: Angela Cosentino Oggetto: Re: [Freesurfer] (no subject) A: "Bruce Fischl" Cc: freesurfer@nmr.mgh.harvard.edu Data: Domenica 13 marzo 2011, 07:49 In t

[Freesurfer] cortical thickness and significance of colored lines

2011-03-13 Thread Angela Cosentino
To see cortical thickness I used "File"--> "Load Curvature" (rh.thick), as you have suggested. In this way, I see the cortical thickness' value near the "curvature" indication, voxel-by-voxel. It's ok? And, when I write the command line in tkmedit: "tkmedit SUBJECT_ID brainmask.mgz -surfs", I s

[Freesurfer] I: I: Re: (no subject)

2011-03-13 Thread Angela Cosentino
I've founded the answer at the second question. Please, tell me if my first sentence is ok. --- Dom 13/3/11, Angela Cosentino ha scritto: Da: Angela Cosentino Oggetto: [Freesurfer] I: Re: (no subject) A: fis...@nmr.mgh.harvard.edu Cc: freesurfer@nmr.mgh.harvard.edu Data: Domenica 13

[Freesurfer] cortical thickness and meaning of colored lines

2011-03-13 Thread Angela Cosentino
To see cortical thickness I used "File"--> "Load Curvature" (rh.thick), as you have suggested. In this way, I see the cortical thickness' value near the "curvature" indication, voxel-by-voxel. It's ok? Thanks. ___ Freesurfer mail