[Freesurfer] trac-preproc: orientLAS and mri_info issue with unsigned shorts

2025-03-28 Thread Mirro, Amy
External Email - Use Caution Hi, Thanks so much for all your work on Freesurfer. I am currently running tracula v7.4 and I am coming across the following error. I believe this error is occurring during the orientLAS call in trac-preproc (the output is copied from my log file):

Re: [Freesurfer] Problem with aparcstats2table

2025-03-28 Thread Rosalia Dacosta Aguayo
External Email - Use Caution Ok, I found the problem, but now when I run in the terminal is telling me that a file is missing and the file is not missing. What should I do? aparcstats2table --hemi rh --subjectsfile subjects.txt --meas thickness --tablefile aparc-stats-thickness.t

[Freesurfer] Problem with aparcstats2table

2025-03-28 Thread Rosalia Dacosta Aguayo
External Email - Use Caution Dear Freesurfer team, I am having a trouble with aparcstats2table I have never seen before and I do not know how to solve it. I have run it with --help and still I don't quite understand it. Any help would be appreciated. Kind regards, Rosie ros