Re: [Freesurfer] mri_convert: Command terminated by signal 9

For what it’s worth, we moved to Beta version 8 and after setting export FS_ALLOW_DEEP=1 it seems to be running fine now. Noah is running it now and it will take several hours to finish before we know if it works 100% for what they want. I installed it the exact same way I did 7.4.1; short of a

Re: [Freesurfer] mri_vol2surf error: GM estimation couldn't find enough samples

Thank you for the response! Below is the command line I used: mri_vol2surf --srcsubject Tract_HC_001_07222016 --hemi lh --projopt /autofs/space/allegro_002/users/hlee/SANDI/pvf/Tract_HC_001_07222016/pvf --projfrac 0 --surf white --srcreg /autofs/space/rhapsody_001/users/Bay8_C1/bids/derivative

Re: [Freesurfer] mri_convert: Command terminated by signal 9

External Email - Use Caution With the .deb and .rpm installers on Linux, you can optionally apt/yum remove freesurfer to delete the old release prior to installing a new release.  A new release will be installed in a subdirectory named after the (different) release version so th

Re: [Freesurfer] Appropriate image for texture/intensity based analysis

External Email - Use Caution Thanks -- how much additional processing would the norm.mgz images have gone through in the longitudinal pipeline compared to base ? It seems they are all in the SST space which leads me to think there is at least additional interpolation -- but are the