[Freesurfer] Case-controls study !

2023-12-08 Thread Martin Juneja
External Email - Use Caution Hello FreeSurfer experts, In my case-control study, I have a dataset of 5 healthy controls (HCs) and one patient (PAT). I was wondering if there is any way to perform GLM for PAT > HCs on brain morphometry data. When I tried to follow instructions fro

[Freesurfer] Clear background from command line

2023-12-08 Thread Datta, Aditya
External Email - Use Caution Hi, Is there any way to clear background for a volume file from the command line. I am attempting to overlay electrodes onto a T1 image, and I would like for the background of the electrode files to be clear when they are loaded from a script. Than