[Freesurfer] $FREESURFER_HOME/bin not being added to PATH (tcsh)

External Email - Use Caution Hello, I am attempting to install FreeSurfer on a Centos 7 workstation using the tcsh shell. Below are the contents of my .cshrc file. Should $FREESURFER_HOME/bin be automatically added to the PATH? I tried rebooting, and it still is not adding it to t

Re: [Freesurfer] $FREESURFER_HOME/bin not being added to PATH (tcsh)

External Email - Use Caution If you add these 2 commands to setup the freesurfer environment, e.g., for csh/tcsh as your default shell, $ setenv FREESURFER_HOME /usr/local/freesurfer/7.4.1-1$ source $FREESURFER_HOME/SetUpFreeSurfer.csh - to your shell initialization file, $HOME/.

[Freesurfer] Hippocampus Segmentation Troubleshoot - Matlab crash

External Email - Use Caution Hi there, I am a Master's student who is looking to segment the hippocampus and analyze diffusion data of the segments. I am trying to utilize the segmentation function with this command: segmentHA_T1.sh subj01 But I am met with this error saying that

Re: [Freesurfer] Hippocampus Segmentation Troubleshoot - Matlab crash

External Email - Use Caution Please try using the Matlab runtime environment which can be installed directly into the freesurfer tree via a script we provide.  The runtime environment is free and requires no paid for Matlab license (since it does not include the Matlab compiler)