[Freesurfer] FW: Survey testing experimental setup

External Email - Use Caution Dear Freesurfer community, Our survey to regarding common practices to test experimental setup will be over soon. If you haven't had time to fill it out just yet, here is the link again. We are looking forward to your responses :) Thanks in advance

[Freesurfer] Longitudinal Stream Error

This is my first time seeking support here so I apologize if I am not familiar with the community's conventions. I am encountering errors when processing Freesurfer longitudinal stream (Freesurfer v6.0). Cross-sectional streams proceeded and completed without error, but base template creation a

[Freesurfer] VM developer password

External Email - Use Caution I understand that this is where I am to request a password to the Ubuntu VM image for the developer account? Please advise. Thanks, Dale ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail

[Freesurfer] Freesurfer with machine learning

External Email - Use Caution Hi everyone, Now that I have done the recon all preprocessing on my structural MRI data, I want to extract the volume and thickness of the gray matter and the surface area to use in a machine learning model. I find it difficult to determine which files

Re: [Freesurfer] VM developer password

External Email - Use Caution Sending to your email shortly. - R. On Feb 8, 2022, at 13:11, Dale Pike wrote:External Email - Use CautionI understand that this is where I am to request a password to the Ubuntu VM image for the developer acco

[Freesurfer] mri_glmfit of surface CBF maps while regressing out cortical thickness

Dear Freesurfer experts, I am trying to run a GLM analysis comparing the difference in the cortical CBF maps between two groups, but I would like to regress out cortical thickness. I read through a post with a similar question (https://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg6505

[Freesurfer] trac-all -prep with intrareg = 2

External Email - Use Caution Hello freesurfer devs, Thank you so much for all of your work on Tracula! I have been following this conversation (https://secure-web.cisco.com/1Ykw2-j5trx6ExR25illKidIACAuQbQ8aKBMO_GQNJvBetczSCKd1Qag-D73npLMv-T9LQAxWCim4zQwoc6bHCXKZVS5Jd0fTRVxpO4UV