Re: [Freesurfer] Tuning WM threshold

2020-02-02 Thread Wright, Paul
External Email - Use Caution Dear Bruce Thanks for the explanation. Is there a way of turning off the -mprage flag from the recon-all command? If not I think I can figure out how to run the first stage taking individual commands from recon-all.cmd. Paul Hi Paul yes, the

Re: [Freesurfer] Cortical segmentation error

2020-02-02 Thread Monica Bondy
External Email - Use Caution Thanks for getting back to me. I've recently asked for help in another thread and sent in the subject directory because the control points didn't work well after my attempt. But I'll take your advice and give it another try. Thank you! On Fri, Jan 31,

Re: [Freesurfer] Tuning WM threshold

2020-02-02 Thread Douglas N. Greve
-no-mprage will do it On 2/2/2020 6:58 AM, Wright, Paul wrote: External Email - Use Caution Dear Bruce Thanks for the explanation. Is there a way of turning off the -mprage flag from the recon-all command? If not I think I can figure out how to run the first stage taking individual c

Re: [Freesurfer] New UCSF Cross-Sectional FreeSurfer (6.0) data

2020-02-02 Thread An Lijun
External Email - Use Caution Hi Hasan Al MarzouqiBest Regards, 1. You need to register firstly by this link. http://adni.loni.usc.edu/data-samples/access-data/ 2. After you get apporval, you could log in to https://ida.loni.usc.edu/login.jsp?project=ADNI&page=HOME 3. After log i