Here are links to images showing the bad midline cut.
Could anybody help me how to solve this issue? The main cause seems to be
asymmetric lateral ventricles.
Best,
Gabor
2017-09-23 8:18 GMT+02:00 Gabor Perlaki :
> Dear all,
> Here is my question again. Somehow, it didn't appear on the Freesurfe
https://mega.nz/#!XAZkWLZa!a6NgkEtiHzEqUkhZ6WimPgUKxytsGHKrgOLfyHdUuEM
https://mega.nz/#!XRRHna7Q!vaeSLG5Cv-fGW-0xdEJlgFTNRPm7qGHOlShYh7y5z1g
2017-09-25 13:50 GMT+02:00 Gabor Perlaki :
> Here are links to images showing the bad midline cut.
> Could anybody help me how to solve this issue? The ma
Hi Gabor
if you fix the aseg labels I think it should correct the midline problem
(rerun autorecon2-wm autorecon3 I think)
cheers
Bruce
On Mon, 25 Sep 2017, Gabor
Perlaki wrote:
Here are links to images showing the bad midline cut.
Could anybody help me how to solve this issue? The main c
I'll try your suggestion. Thank you very much.
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Hello FreeSurfer developers,
This is a piece of code I came across for producing a functional label with
using time course estimates from MEG/EEG data, for freesurfer use. I am
wondering if something similar is available to estimate a functional
label/region from fMRI data with similar treshol
Dear Tiril,
Were you pointed to downloading a version of Java when you first tried to run
the subfields? If so, did you follow the instructions?
Cheers,
/Eugenio
--
Juan Eugenio Iglesias
ERC Senior Research Fellow
Translational Imaging Group
University College London
http://www.jeiglesias.com
htt
Dear Max,
It seems that a basic call to mri_robust_register is failing. Can you please
try running this command, to make sure that there isn’t a problem with the
license?
Cheers,
/Eugenio
--
Juan Eugenio Iglesias
ERC Senior Research Fellow
Translational Imaging Group
University College London
ht
-- Forwarded message --
From: miracle ozzoude
Date: Fri, Sep 22, 2017 at 2:17 PM
Subject: longtitudinal pipeline
To: Douglas N Greve
Hello Freesurfer,
For the longitudinal pipeline, the website/ recon-all -help suggested that
I calculate the different on the results from the l
I am trying to create a high-resolution image to use with mne in
mne_analyze. I first ran mkheadsurf -subjid s and this did not result in
any errors.
I then ran mne_surf2bem --surf ../surf/lh.seghead --id 4 --check --fif
s-head.fif
and ran into an error about vertices for a few of my subjects.
in
Hi Anna
perhaps this is a question for Matti (ccd)?
cheers
Bruce
On Mon, 25 Sep 2017, Anna Kasdan
wrote:
I am trying to create a high-resolution image to use with mne in mne_analyze. I
first ran mkheadsurf
-subjid s and this did not result in any errors.
I then ran mne_surf2bem --surf ../s
Hi Idil, I'm not going to plow through someone else's code:) If you want
to summarize what it does, I might be able to figure out if we have
something that does it.
On 09/25/2017 03:21 PM, Yagmur Ozdemir 19 wrote:
> Hello FreeSurfer developers,
>
> This is a piece of code I came across for prod
On 09/24/2017 02:17 PM, miracle ozzoude wrote:
>
>
> Sent from my BlackBerry 10 smartphone.
> *From: *miracle ozzoude
> *Sent: *Friday, September 22, 2017 9:37 PM
> *To: *Douglas N Greve
> *Subject: *sim-sign abs/ cluster summary results confirmation
>
>
> Hello,
>
> I ran cortical thickness ana
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