[Freesurfer] Probtrackx2

2015-11-28 Thread angela . favaro
Hi all, I have a series of volumetric GM masks that I used to calculate a functional connectivity matrix. Now I want to use the same masks to calculate a structural connectivity matrix (number of streamlines). I registered all masks in diffusion space for all subjects. My idea was to use probtrackx

Re: [Freesurfer] FS v.6.0

2015-11-28 Thread Bruce Fischl
Hi Trinh why not just rerun with 6.0? It should preserve all your manual edits, so it's just computer time cheers Bruce On Thu, 26 Nov 2015, Thục Trinh wrote: Hello Freesurfer experts, I used recon-all command for all my subject by FS v.5.3. But now I decide to upgrade to FS v.6 to eliminate