Dear all,
We, members from the Donders Institute Nijmegen (The Netherlands), are using
FreeSurfer to calculate amygdala volumes on MRI's. After a couple of tests we
are suprised about the following:
We are wondering why the amygdala volume changes, after changing the watershed
threshold. Besid
Hi Anne
I suspect that if you removed enough manually it would change. The
atlas-based registration will change if the skull-stripping changes
significantly, which will change the resulting segmentation.
cheers
Bruce
On Sun, 20 Mar 2011, Hendrikx, A.A.E.M. (Anne) wrote:
> Dear all,
>
> We,
it seems we could run lh/rh processing stages of recon-all in parallel.
however, i think they will write to the same log files. is there a way to
specify a different log-file prefix?
are there any other common files that these hemisphere based operations
write to? concurrent reading i'm assuming i
HI
Is it possible to compile Freesurfer with openmpi. Will there be plans
to add openmpi or another for for multicore support.
On 03/17/2011 09:45 PM, jim kroger wrote:
Hello, I just downloaded freesurfer and am processing some of my data.
I am using an 8 core machine, but I'm guessing free
Hi Jim
we've been focusing on CUDA instead, and we do have a released CUDA
version.
cheers
Bruce
On Sun, 20 Mar 2011, Knut J Bjuland wrote:
> HI
>
> Is it possible to compile Freesurfer with openmpi. Will there be plans to add
> openmpi or another for for multicore support.
>
>
>
> On 03/17/20
