Re: [Freesurfer] recon-all on T1s without anterior coil

2017-06-12 Thread Bruce Fischl
it seems likely you will want to rescan. cheers Bruce On Mon, 12 Jun 2017, Gullickson, James wrote: > Bruce, > Thanks for the input. We use a 32 channel head coil with two elements: an > anterior one, and a posterior one. Thus, half of the coil was inactive. I > ran the subject through the stan

Re: [Freesurfer] recon-all on T1s without anterior coil

2017-06-12 Thread Gullickson, James
Bruce, Thanks for the input. We use a 32 channel head coil with two elements: an anterior one, and a posterior one. Thus, half of the coil was inactive. I ran the subject through the standard recon -all just to see what happened, and it looks like there were some significant errors (see attached i

Re: [Freesurfer] recon-all on T1s without anterior coil

2017-06-11 Thread Bruce Fischl
Hi James it's hard to say. How many coil elements were off? You could try with anterior control points, but you might not be able to include this subject in a group study cheers Bruce On Sun, 11 Jun 2017, Gullickson, James wrote: > Hello all, > We have a subject whose T1s were collected with