Hi Anna
from your log file it looks like some other process is using more than 2/3
of the memory on your machine:
total used free sharedbuffers cached
Mem: 24729588 1685252478770644095060 0 10543292
-/+ buffers/cache:6309232
It looks like brainmask.mgz might have been corrupted. Can you run
mri_info on it? Does its size look about right? Can you create
brainmask.mgz again?
On 3/29/18 4:06 PM, Anna Daniels wrote:
Dear FreeSurfer team,
after editing the brainmask.mgz (manually or with gcut),
brain.finalsurfs.mane