Re: [Freesurfer] error at 3d normalization pass 1 of 2 stage with MP2RAGE data

2021-07-01 Thread Garcia Pallares, Erendira Xenia
Date: Thursday, June 3, 2021 at 7:28 AM To: Freesurfer support list Subject: Re: [Freesurfer] error at 3d normalization pass 1 of 2 stage with MP2RAGE data External Email - Use Caution Hi Bruce, I am just following up on this. Were you able to get mri_normalize to run on this mp2rage

Re: [Freesurfer] error at 3d normalization pass 1 of 2 stage with MP2RAGE data

2021-06-03 Thread Corinna Bauer
un...@nmr.mgh.harvard.edu < >> freesurfer-boun...@nmr.mgh.harvard.edu> *On Behalf Of *Corinna Bauer >> *Sent:* Wednesday, May 5, 2021 6:45 PM >> *To:* Freesurfer support list >> *Subject:* Re: [Freesurfer] error at 3d normalization pass 1 of 2 stage >> with MP2R

Re: [Freesurfer] error at 3d normalization pass 1 of 2 stage with MP2RAGE data

2021-05-05 Thread Fischl, Bruce
at 3d normalization pass 1 of 2 stage with MP2RAGE data External Email - Use Caution Hi Bruce, The nu.mgz input into mri_normalize looks ok to me (screenshot attached), as does the talairach registration. Corinna On Wed, May 5, 2021 at 5:39 PM Fischl, Bruce mailto:bfis

Re: [Freesurfer] error at 3d normalization pass 1 of 2 stage with MP2RAGE data

2021-05-05 Thread Fischl, Bruce
Can you take a look at the volume that was the input to mri_normalize and see if it looks ok? And check the talairach From: freesurfer-boun...@nmr.mgh.harvard.edu On Behalf Of Corinna Bauer Sent: Wednesday, May 5, 2021 5:25 PM To: Mailing Freesurfer List Subject: [Freesurfer] error at 3d norma