Re: [Freesurfer] edits not effective

2004-09-09 Thread Bruce Fischl
Hi Kevin, is the fill failing? Can you send along the logs? cheers, Bruce On Thu, 9 Sep 2004, Kevin DeSimone wrote: i have a subject (who is not out of the ordinary) where the cerebellum is sticking to one hemisphere. i make the usual edits on the segmentation, and indicate the coordinates for

Re: [Freesurfer] edits not effective

2004-09-09 Thread Yasunari Tosa
Is there a reason why you don't want to use the talairach.xfm? MNI mritotal does a reasonable job when the image is a good T1 volume. Making mri_fill work is best done by using the talairach.xfm. Tosa Yasunari Tosa, Ph.D. Email: [EMAIL PROTECTED] NMR Ctr, Mass. General HospitalTEL

Re: [Freesurfer] edits not effective

2004-09-09 Thread Evelina Busa
Hi Kevin, Are you using Talairach co-ordinates? Is the talairach.xfm okay -- does it look reasonable? On Thu, 9 Sep 2004, Kevin DeSimone wrote: > i have a subject (who is not out of the ordinary) where the cerebellum > is sticking to one hemisphere. i make the usual edits on the > segmenta