Re: [Freesurfer] autorecon3 error

2013-06-11 Thread Bruce Fischl
t; > Neither of them look bad, it looks very spherical, an has nothing strange to my eyes... > Any other ideas??? > > Best Regards > Gabriel > > > > - Mensaje original ----- > De: Bruce Fischl > Fecha: Jueves, 6 de Junio de 2013, 6:16 pm > Asunto: Re: [Freesurf

Re: [Freesurfer] autorecon3 error

2013-06-11 Thread Gabriel Gonzalez Escamilla
I'm re-sending an old problem, because I received no answer. Cheers, Gabriel - Mensaje original - De: Gabriel Gonzalez Escamilla Fecha: Lunes, 10 de Junio de 2013, 4:56 pm Asunto: Re: [Freesurfer] autorecon3 error A: Bruce Fischl CC: freesurfer@nmr.mgh.harvard.edu > D

Re: [Freesurfer] autorecon3 error

2013-06-10 Thread Gabriel Gonzalez Escamilla
ards Gabriel - Mensaje original - De: Bruce Fischl Fecha: Jueves, 6 de Junio de 2013, 6:16 pm Asunto: Re: [Freesurfer] autorecon3 error A: Gabriel Gonzalez Escamilla CC: freesurfer@nmr.mgh.harvard.edu > Hi Gabriel > > seems like something is wrong with that surface file

Re: [Freesurfer] autorecon3 error

2013-06-06 Thread Bruce Fischl
Hi Gabriel seems like something is wrong with that surface file. Can you load the lh.sphere.reg in tksurfer and see if it looks ok? Bruce On Thu, 6 Jun 2013, Gabriel Gonzalez Escamilla wrote: Dear Freesurfers I am running an autorecon3 to the same subject that Rafa sent you (the name loo

Re: [Freesurfer] autorecon3 error

2013-06-03 Thread Claudia Dacquino
Ok. Thanks a lot! Cheers Claudia Il giorno lunedì 3 giugno 2013, Bruce Fischl ha scritto: > yes, you should be running > > recon-all -autorecon2-cp > > cheers > Bruce > > On Mon, 3 Jun 2013, Claudia Dacquino wrote: > > Is this the problem? Is there an incorrect command? >> Thanks.Cheers >>

Re: [Freesurfer] autorecon3 error

2013-06-03 Thread Bruce Fischl
yes, you should be running recon-all -autorecon2-cp cheers Bruce On Mon, 3 Jun 2013, Claudia Dacquino wrote: Is this the problem? Is there an incorrect command? Thanks.Cheers Claudia Il giorno lunedì 3 giugno 2013, Bruce Fischl ha scritto: Hi Claudia there is no autorecon3-

Re: [Freesurfer] autorecon3 error

2013-06-03 Thread Claudia Dacquino
Is this the problem? Is there an incorrect command? Thanks. Cheers Claudia Il giorno lunedì 3 giugno 2013, Bruce Fischl ha scritto: > Hi Claudia > > there is no autorecon3-cp, just autorecon2-cp > > cheers > Bruce > On Mon, 3 Jun 2013, Claudia Dacquino wrote: > > Hi Freesurfers, >> I did autorec