ber 14, 2017 9:47:54 AM
> *To:* Arsenije Subotic
> *Subject:* Re: [Freesurfer] Qdec Table Loading Error
> The table is not quite the right format. Your first line is
>
>
> lh.aparc.thickness lh_MeanThickness_thickness
> BrainSegVolNotVent eTIV gender age
>
>
>
can you send the table?
On 12/12/2017 01:18 PM, Arsenije Subotic wrote:
>
> Dear experts,
>
>
> I'm currently trying to import some of my data into Qdec in order to
> perform a group analysis on cortical thickness. All of my data was
> originally in an excel sheet and it had the following varia
I don't know what you did, but that is still a binary file not a text file
On 2/7/17 4:27 PM, Leblanc Élizabel wrote:
Hi Freesurfer's expert,
I have some trouble with the dec.table.dat file, as many others as I can see. I
am using a mac OS x, I took an excel file with my 4 variables and open
It was the spaces! Thanks for the help
On Jan 13, 2017, at 11:40 AM, Douglas N Greve
mailto:gr...@nmr.mgh.harvard.edu>> wrote:
I'm not sure that QDEC can read in a CSV file. Can you remove the commas
and try again? You'll also have to remove the spaces between column headings
On 01/13/2017 10:5
I'm not sure that QDEC can read in a CSV file. Can you remove the commas
and try again? You'll also have to remove the spaces between column headings
On 01/13/2017 10:55 AM, Paul Rowley wrote:
> Good morning,
> I’m experiencing issues importing data into QDEC. When I upload the table,
> this is
Scratch that - I simply changed the level name from "blind" to "EB" and it
worked. Clearly qdec didn't like my naming assignments.
Thanks anyway!
Gabriella
From: freesurfer-boun...@nmr.mgh.harvard.edu
[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] On Behalf Of Hirsch, Gabriella
Sent: Thursday,
Thanks Doug - Nick, do you have any idea what might be happening here? Why
might qdec stop allowing me to select more than one continuous variable?
Thanks!
Laura.
Message: 24
Date: Mon, 04 Jun 2012 11:19:57 -0400
From: Douglas N Greve
Subject: Re: [Freesurfer] qdec table file
To: freesurfer
OK, I've replicated that this is happening, but Nick will have to take a
look.
doug
On 06/04/2012 11:05 AM, Laura M. Tully wrote:
>
>
>
> Hi Doug,
>
> Attached is the qdec table file and associated levels files. It's
> strange that qdec won't let me select more than one continuous
> variable. W
the 'generate stats data tables' button in the Subjects tab will do
this. see the section 'Stats Data Import' in the tutorial:
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/QdecGroupAnalysis
which is copied here:
> It is possible to import the aseg and aparc data from the
> FreeSurfer-pro
there a line break script, which is somehow installed in my system (Sentos),
which cleans this up. you basically type lb "FILENAME"
i can't try and find out what it contains, if you can't get it to work
On 22 September 2010 11:28, James Porter wrote:
> Hello-
>
> I'm having a resurgence of an
there shouldn't be a limit on the number of columns it will read. the
thing to be careful about is the name of a column. sometimes when
importing a spreadsheet, a column name will consist of two words (thus
messing-up the detected number of columns), or it will have a minus "-"
char in the name,
Of course, once I ask
for help I stumble immediately upon the solution. There appears to
be a limit to the number of columns that QDEC is willing to put up
with when reading in tables. If I create a table that only has the
few columns that I'm interested in (as o
can you send me the file?
n.
On Wed, 2010-09-22 at 10:28 -0500, James Porter wrote:
> Hello-
>
> I'm having a resurgence of an old problem
> (http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg12152.html)
> but the old solution is not cutting it. When I try to load a table in QDEC
Nathan,
Here are the steps I use to create QDEC dat files on a Mac:
-Export/save your data in SPSS/Excel as a .csv file
-Open the .csv file in TextWrangler (a free text editor for Mac)
-Do a Find & Replace of the "," for " " to make it a space
separated file
-Down at the bottom of the TextWran
Some programs notoriously add Ctrl-M at the end of every line ( or
every cell )
If you have the vi editor you can follow this method
http://www.tech-recipes.com/rx/150/remove-m-characters-at-end-of-lines-in-vi/
to remove all the instances of Ctrl-M and again try in qdec.
Unfortunately I am
Unfortunately I'm not running windows. Are you familiar with any tricks I can
use on a mac?
On 11/17/09 5:15 PM, "Douglas N Greve" wrote:
If you're creating the file in windows, try running dos2unix on the file.
doug
Dankner, Nathan (NIH/NIMH) [F] wrote:
> Hi all,
>
> I am attempting to cre
If you're creating the file in windows, try running dos2unix on the file.
doug
Dankner, Nathan (NIH/NIMH) [F] wrote:
> Hi all,
>
> I am attempting to create a qdec.table.dat file, and have been unable to find
> a way to paste my data into it in a way that will make it readable. When I
> paste
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