Re: [Freesurfer] Matlab and FS {Disarmed}

2011-07-07 Thread jorge luis
: Carolina Valencia Asunto: Re: [Freesurfer] Matlab and FS Para: "jorge luis" CC: freesurfer@nmr.mgh.harvard.edu Fecha: jueves, 7 de julio, 2011 15:30 Hi Jorge, Thanks for your reply,  I installed Octave in the Ubuntu machine, Should I setup something in order to use the FS commands? Be

Re: [Freesurfer] Matlab and FS

2011-07-07 Thread Carolina Valencia
Hi Jorge, Thanks for your reply, I installed Octave in the Ubuntu machine, Should I setup something in order to use the FS commands? Best regards, Carolina 2011/7/5 jorge luis > > > Hi Carolina > > ** > > There is a directory freesurfer/matlab which contains several matlab-based > scripts

Re: [Freesurfer] Matlab and FS

2011-07-05 Thread Bruce Fischl
Hi Carolina, the thickness in each region can be obtained either from the aparc.stats file or in matlab by loading the thickness using read_curv.m and the various label files with read_label.m. Make sure to account for the indices being one-based in the return from read_curv.m, but zero-based i

Re: [Freesurfer] Matlab and FS

2011-07-05 Thread jorge luis
  Hi Carolina   There is a directory freesurfer/matlab which contains several matlab-based scripts for reading and writing (after modified) surface- and volume-based data generated in freesurfer. Transport files from Linux to Windows will be tedious and things may not work properly, therefore,