Hi Carolina
 
There is a directory freesurfer/matlab which contains several matlab-based 
scripts for reading and writing (after modified) surface- and volume-based data 
generated in freesurfer. 
Transport files from Linux to Windows will be tedious and things may not work 
properly, therefore, I recommend you to install Matlab for Linux or you can try 
with Octave (a kind of GNU Matlab for Linux).
 
Cheers 
Jorge

--- El mar, 5/7/11, Carolina Valencia <cvalen...@linkdx.com.co> escribió:


De: Carolina Valencia <cvalen...@linkdx.com.co>
Asunto: [Freesurfer] Matlab and FS
Para: freesurfer@nmr.mgh.harvard.edu
Fecha: martes, 5 de julio, 2011 17:39


Hello FS'users,

I'm trying to do an histogram of cortical thickness for 2 cases in matlab, but 
the problem is that I have Installed matlab in a computer (windows) and FS in 
another one (ubuntu)
Can I configure something to use the FS commands in matlab in order to obtain 
some graphs?
And also, where can I find the cortical thickness in each regions (Brodmann 
areas, gyrus or sulci) of the brain in order to compare a normal patient with a 
patiwnt who has a cortical dysplasia ?

Thanks a lot for your help,

Carolina


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