Re: [Freesurfer] Error in mri_glmfit

2022-01-27 Thread Laura Willers de Souza
External Email - Use Caution Sorry for such a simple mistake and thank you so much for all the help! Best, Laura. ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

Re: [Freesurfer] Error in mri_glmfit

2022-01-26 Thread Douglas N. Greve
I think the issue may be the use of commas (,) instead of decimal points (.). You an convert it easily with cat yourfsgd | sed 's/,/\./g' > yournewfsgd On 1/12/2022 12:10 PM, Laura Willers de Souza wrote: External Email - Use Caution Hello FreeSurfer Developers, I want to perform an

Re: [Freesurfer] error in mri_glmfit-sim using a per-vertex regressor

2015-11-30 Thread Douglas Greve
that is just a warning, it is not a problem. the results should be fine On 11/30/15 6:28 AM, Carme Uribe Codesal wrote: Dear FreeSurfer users, I am trying to add a per-vertex regressor in my general lineal model (a cortical thickness analysis with the white matter-grey matter contrast paramet

Re: [Freesurfer] error in mri_glmfit-sim when using --bg and doss

2014-02-24 Thread Douglas N Greve
t; All the best. > Rujing Zha > 2014-02-22 > > charujing123 > > *发件人:*Douglas Greve > *发送时间:*2014-02-21 23:49 > *主题:*Re: [Freesurfer] er

Re: [Freesurfer] error in mri_glmfit-sim when using --bg and doss

2014-02-21 Thread charujing123
发件人:Douglas Greve 发送时间:2014-02-21 23:49 主题:Re: [Freesurfer] error in mri_glmfit-sim when using --bg and doss 收件人:"freesurfer" 抄送: When you actually run the simulation, it only runs it for the first contrast. The simulation is the same for all contrasts, so you can just copy the

Re: [Freesurfer] error in mri_glmfit-sim when using --bg and doss

2014-02-21 Thread Douglas Greve
When you actually run the simulation, it only runs it for the first contrast. The simulation is the same for all contrasts, so you can just copy the csd files from the first contrast to the others, then run mri_glmfit-sim with the --no-sim option doug On 2/21/14 5:47 AM, charujing123 wrote

Re: [Freesurfer] error in mri_glmfit-sim

2009-11-09 Thread Roser Sala
True, I am using version 4.3.1. Can I update only mri_glmfit-sim script?? Thanks 2009/11/9 Douglas N Greve > What version are you using? I think this was a problem with 4.3. > > doug > > Roser Sala wrote: > >> Dear all, >> >> I am running a surface-based group analysis. When I try to run >> mr

Re: [Freesurfer] error in mri_glmfit-sim

2009-11-09 Thread Douglas N Greve
What version are you using? I think this was a problem with 4.3. doug Roser Sala wrote: > Dear all, > > I am running a surface-based group analysis. When I try to run > mri_glmfit-sim, I always get the following error: > > ERROR: you must supply --fwhm with --sim, even if it is 0 > > I get this