Re: [Freesurfer] Error in QDEC

2020-11-02 Thread Douglas N. Greve
sorry, we are not supporting qdec anymore. Please use the command line tools (mris_preproc, mri_surf2surf, mri_glmfit, mri_glmfit-sim). See the tutorials On 10/16/2020 6:14 AM, Koustav Chatterjee wrote: External Email - Use Caution Hello, I have found the following error while click

Re: [Freesurfer] Error in qdec

2020-06-29 Thread Douglas N. Greve
Hard to say. We are not supporting QDEC anymore for these types of reasons. Can you cut and paste that mri_glmfit command into the terminal and see what happens? On 6/29/2020 7:05 AM, Mateus Aranha wrote: External Email - Use Caution Hello, Iḿ trying to perform a group analysis usin

Re: [Freesurfer] Error in QDEC -"Generate Stats Data Tables"

2015-12-21 Thread Douglas N Greve
can you cut and paste the error into the email rather than sending a jpeg? Your image cut off the most important part On 12/14/2015 09:54 PM, nellie wrote: > > Hi Freesurfer experts, > > When I tried to use *"Generate Stats Data Tables*" in QDEC, some > errors came out. The related screenshot i

Re: [Freesurfer] Error in qdec: load data file

2014-02-20 Thread Douglas N Greve
Can you send the qdec table? doug On 02/20/2014 11:45 AM, Miranka Wirth wrote: > Hi FreeSurfers, > > I have trouble loading the .dat file into qdec, receiving the > following error message: > Verifying subject data.sh: 1: Syntax error: Bad fd number > > ERROR: QdecProject::VerifySubjects: Couldn

Re: [Freesurfer] Error in qdec longitudinal 5.1

2011-07-26 Thread Martin Reuter
Hi Natalia, /TemplateSub1/surf/lh.thckness.fwhm10.fsaverage.mgh there is an 'i' missing in thckness (but that might be just a typo). also this is a regular thickness file. You cannot analyze the thickness in the base. That is meaningless, you need to select one of the other files in qdec, e.g. t

Re: [Freesurfer] Error in qdec longitudinal 5.1

2011-07-25 Thread Martin Reuter
Hi Natalia, check your qdec/.QDECRC file, it needs to contain: MEASURE1 = long.thickness-avg MEASURE2 = long.thickness-rate MEASURE3 = long.thickness-pc1 MEASURE4 = long.thickness-spc probably you put a .spc instead of -spc Best, Martin On Fri, 2011-07-22 at 18:51 +0200, Natalia h wrote: > Dea

Re: [Freesurfer] error in qdec design analyze

2011-07-01 Thread Tetiana Dadakova
Hi Sophy, According to Qdec wiki page, you should also run recon-all -s -qcache This will create the pre-smoothed surfaces in surf/ directory. Best wishes, Tanja. On Wed, Jun 29, 2011 at 3:16 AM, Sophy Zhu wrote: > > Hi Freesurfers, > > There existed an error "Error in Analyze: Couldn't open